Critical retinal disease detection from optical coherence tomography images by deep convolutional neural network and explainable machine learning

Abstract

Retinal disease diagnosis by machine learning can be achieved using Deep Neural Network based predictors. Use of Explainable Artificial Intelligence (XAI) has the potential to explain the black box of those neural network models which are used in identifying critical retinal diseases. Due to lack of explanation in neural networks, Machine Learning based systems are not well trusted in medical field. People still have to rely on the doctor’s clarification to come into any conclusion with medical issues. In our proposed model, we have used several Convolutional Neural Net work (CNN) models leveraging transfer learning to identify some of the critical reti nal diseases such as Choroidal Neovascularization (CNV), Diabetic Macular Edema (DME), DRUSEN from Optical Coherence Tomography (OCT) images along with the explanation. For our classification task, we have used four different CNN models namely which are ResNet 50, inceptionv3, xception, VGG 16. At first, A dataset of several thousand OCT images consisting of four classes: CNV, DME, DRUSEN, and Normal were collected. Afterward, The dataset were pre-processed and applied to our proposed CNN models to classification. We achieved the accuracy gradually 95.20 %, 94.00 %, 96.30 % and 93.30 % by performing the four deep learning model respectively Inception V3, ResNet50, VGG16, and Xception. Eventually, in order to understand the results produced by the black box models, we applied a method of Explainable AI named Layer-wise Propagation (LRP) for a better understanding of retinal disease detection by the CNN models. To add with, the LRP have analysed the models with back propagation and focused on the area of the input image based on the model’s training parameters. To sum up, our proposed model has been able to perform critical retinal diseases detection as well as the explanation behind the identification.

Description

Cataloged from PDF version of thesis.
Includes bibliographical references (pages 49-52).
This thesis is submitted in partial fulfillment of the requirements for the degree of Bachelor of Science in Computer Science and Engineering, 2021.

Keywords

Machine Learning, Image classification, Artificial Intelligence, Optical Coherence Tomography, CNN, Inception V3, Resnet50, VGG16, Xception, Black Box, LRP

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